PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART04G17300.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 282aa    MW: 30663.7 Da    PI: 10.0401
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART04G17300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-1183141563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l++l+     l+se+
  OBART04G17300.1  83 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLSMLQRDTTGLTSEN 141
                      9************************************************9999998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-1879143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.13981144IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-1183138No hitNo description
PfamPF001701.1E-983141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-1183138No hitNo description
CDDcd147039.10E-2284133No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEGAGGSRMF EMFLEAGGKL ETPEPAAPLP PPPARPRHQH SMSMDGSTSL ASSAAGVAGR  60
MGADAKKAIS DAKLAELALV DPKRAKRILA NRQSAARSKE RKMRYIAELE RKVQTLQTEA  120
TTLSAQLSML QRDTTGLTSE NSDLKIRVQT MEQQVRLQDA LNDRLRDEIQ QLKVATGQVN  180
ANCGKVGNFG LSSFGGANPQ GYQRSHIQSL LAAQQLQQLQ IHSQHQQQQM HLQQHHHLSA  240
VQQQLLQEGL PLPGDLKMKG IVAASHAQND GASESHALRS EP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0644290.0AK064429.1 Oryza sativa Japonica Group cDNA clone:002-110-C11, full insert sequence.
GenBankAL6066270.0AL606627.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence.
GenBankAP0149600.0AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
GenBankCP0126120.0CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence.
GenBankCR8551960.0CR855196.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159F11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015633411.10.0PREDICTED: transcription factor RF2a-like
SwissprotQ040881e-69POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A0D3FXG20.0A0A0D3FXG2_9ORYZ; Uncharacterized protein
STRINGORGLA04G0144200.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123022937
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.18e-69bZIP family protein